STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111218494ULP_PROTEASE domain-containing protein. (1087 aa)    
Predicted Functional Partners:
sumo1
Small ubiquitin-related modifier.
    
 0.782
senp1
Si:dkey-21c19.3.
    
0.777
LOC111225429
SUMO specific peptidase 2.
    
0.777
sumo2
Small ubiquitin-related modifier.
    
 0.750
SUMO3
Small ubiquitin-related modifier.
    
 0.750
LOC111218242
Small ubiquitin-related modifier.
    
 0.750
LOC111236357
Small ubiquitin-related modifier.
    
 0.750
ENSSDUP00000008140
Rad60-SLD domain-containing protein.
    
 0.698
tex10
Testis expressed 10.
    
 0.601
Las1l
Uncharacterized protein.
   
 0.587
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.