STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111218032Aminopeptidase. (959 aa)    
Predicted Functional Partners:
gclc
Glutamate-cysteine ligase, catalytic subunit.
     
 0.925
GGT7
Gamma-glutamyltransferase 7.
     
 0.924
ggt1
Gamma-glutamyltransferase 1a.
     
 0.922
LOC111230947
Gamma-glutamyltransferase 5a.
     
 0.922
LOC111229479
Uncharacterized protein.
     
 0.922
LOC111234223
Uncharacterized protein.
     
 0.922
LOC111234237
Gamma-glutamyltransferase 1b.
     
 0.922
lap3
Leucine aminopeptidase 3.
  
 0.918
LOC111237731
Zgc:152830.
  
 0.917
gss
Glutathione synthetase.
   
 
 0.911
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.