STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111235088Zgc:172302. (2383 aa)    
Predicted Functional Partners:
LOC111231607
Uncharacterized protein.
  
  
 
0.902
LOC111229245
ATP-binding cassette, sub-family A (ABC1), member 1A.
  
  
 
0.902
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.643
LOC111235756
Uncharacterized protein.
   
 0.577
LOC111235780
Uncharacterized protein.
   
 0.577
apoa4
Apolipoprotein A-Ib.
    
 0.531
LOC111227597
Nuclear receptor subfamily 1, group H, member 5.
    
 0.457
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
    
 0.457
LOC111234393
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 0.431
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (18%) [HD]