STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nsl1NSL1 component of MIS12 kinetochore complex. (257 aa)    
Predicted Functional Partners:
LOC111227209
DSN1 component of MIS12 kinetochore complex.
   
 0.994
LOC111232709
Si:dkey-6i22.5.
    
 0.987
mis12
MIS12 kinetochore complex component.
    
 0.979
nuf2
UF2 component of NDC80 kinetochore complex.
   
 0.934
spc24
SPC24 component of NDC80 kinetochore complex.
   
 0.932
ndc80
NDC80 kinetochore complex component.
   
 0.926
spc25
SPC25 component of NDC80 kinetochore complex.
   
 0.913
ENSSDUP00000014731
Protein kinase domain-containing protein.
   
 0.746
bub1
BUB1 N-terminal domain-containing protein.
   
 0.746
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.716
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.