STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000011831Microfibril associated protein 2. (40 aa)    
Predicted Functional Partners:
ENSSDUP00000013582
Microfibril associated protein 5.
   
 
 0.728
fbln5
Fibulin 5.
     
 0.626
dbf4
DBF4 zinc finger.
   
 
 0.594
ENSSDUP00000029806
DBF4-type domain-containing protein.
   
 
 0.594
LOC111231064
Lysyl oxidase-like 5b.
   
 
 0.553
MFAP3
Microfibril associated protein 3.
     
 0.515
LOC111219699
Fibrinogen C-terminal domain-containing protein.
   
 
 0.492
MFAP4
Microfibril associated protein 4.
   
 
 0.492
LOC111217549
Fibrinogen C-terminal domain-containing protein.
   
 
 0.492
dcn
Decorin; May affect the rate of fibrils formation.
   
  
 0.481
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.