STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000011863Uncharacterized protein. (189 aa)    
Predicted Functional Partners:
mpl
MPL proto-oncogene, thrombopoietin receptor.
    
 0.870
kitlg
Kit ligand a.
      
 0.641
zranb2
Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family.
      
 0.636
LOC111223701
Erythropoietin receptor.
      
 0.595
cd34
Si:ch211-286o17.1.
      
 0.593
rpl32
Ribosomal protein L32.
      
 0.561
epo
Erythropoietin a.
      
 0.556
LOC111230068
CD4-1 molecule.
      
 0.538
rpl13a
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
      
 0.528
fosb
FBJ murine osteosarcoma viral oncogene homolog B.
      
 0.469
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.