STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111224349Transferrin receptor 1b. (756 aa)    
Predicted Functional Partners:
LOC111238969
Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.
  
 0.959
LOC111229136
Transferrin receptor 1a.
  
  
 
0.903
LOC111229135
Transferrin receptor 1a.
  
  
 
0.903
LOC111223701
Erythropoietin receptor.
    
 0.781
LOC111234021
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
     
 0.670
meltf
Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.
  
 0.612
LOC111222825
Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.
  
 0.612
LOC111225809
Otolith matrix protein.
  
 0.596
pxdn
Peroxidasin.
      
 0.554
ap2s1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.520
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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