STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000011921Lysyl oxidase-like 4. (355 aa)    
Predicted Functional Partners:
ENSSDUP00000011951
Lysyl oxidase-like 4.
 
      0.892
LOC111239245
Uncharacterized protein.
 
   
  0.790
LOC111234195
Lysyl oxidase a.
 
   
  0.785
LOC111231064
Lysyl oxidase-like 5b.
 
 
  0.691
ENSSDUP00000001557
Lysyl oxidase-like 5a.
 
   
  0.665
LOC111220595
Lysyl oxidase-like 1.
 
   
 0.577
ENSSDUP00000004365
Uncharacterized protein.
   
 0.469
LOC111232025
Im:7152348.
   
 0.408
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.