Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000000294 | ENSSDUP00000003957 | ENSSDUP00000000294 | ENSSDUP00000003957 | PDZ domain-containing protein. | Vesicle-associated membrane protein 1. | 0.731 |
ENSSDUP00000000294 | LOC111220141 | ENSSDUP00000000294 | ENSSDUP00000010673 | PDZ domain-containing protein. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.714 |
ENSSDUP00000000294 | LOC111220465 | ENSSDUP00000000294 | ENSSDUP00000012008 | PDZ domain-containing protein. | Syntaxin 4; Belongs to the syntaxin family. | 0.838 |
ENSSDUP00000000294 | LOC111222203 | ENSSDUP00000000294 | ENSSDUP00000021594 | PDZ domain-containing protein. | Vesicle-associated membrane protein 2. | 0.731 |
ENSSDUP00000000294 | LOC111227906 | ENSSDUP00000000294 | ENSSDUP00000013539 | PDZ domain-containing protein. | Syntaxin binding protein 1b; Belongs to the STXBP/unc-18/SEC1 family. | 0.962 |
ENSSDUP00000000294 | LOC111230108 | ENSSDUP00000000294 | ENSSDUP00000016148 | PDZ domain-containing protein. | Zgc:92912. | 0.731 |
ENSSDUP00000000294 | snap23 | ENSSDUP00000000294 | ENSSDUP00000014084 | PDZ domain-containing protein. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.714 |
ENSSDUP00000000294 | snap25 | ENSSDUP00000000294 | ENSSDUP00000007869 | PDZ domain-containing protein. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.714 |
ENSSDUP00000000294 | vamp3 | ENSSDUP00000000294 | ENSSDUP00000001421 | PDZ domain-containing protein. | V-SNARE coiled-coil homology domain-containing protein. | 0.731 |
ENSSDUP00000003957 | ENSSDUP00000000294 | ENSSDUP00000003957 | ENSSDUP00000000294 | Vesicle-associated membrane protein 1. | PDZ domain-containing protein. | 0.731 |
ENSSDUP00000003957 | LOC111220141 | ENSSDUP00000003957 | ENSSDUP00000010673 | Vesicle-associated membrane protein 1. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.892 |
ENSSDUP00000003957 | LOC111220465 | ENSSDUP00000003957 | ENSSDUP00000012008 | Vesicle-associated membrane protein 1. | Syntaxin 4; Belongs to the syntaxin family. | 0.908 |
ENSSDUP00000003957 | LOC111227906 | ENSSDUP00000003957 | ENSSDUP00000013539 | Vesicle-associated membrane protein 1. | Syntaxin binding protein 1b; Belongs to the STXBP/unc-18/SEC1 family. | 0.754 |
ENSSDUP00000003957 | RIMS2 | ENSSDUP00000003957 | ENSSDUP00000011834 | Vesicle-associated membrane protein 1. | Regulating synaptic membrane exocytosis 2. | 0.731 |
ENSSDUP00000003957 | snap23 | ENSSDUP00000003957 | ENSSDUP00000014084 | Vesicle-associated membrane protein 1. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.936 |
ENSSDUP00000003957 | snap25 | ENSSDUP00000003957 | ENSSDUP00000007869 | Vesicle-associated membrane protein 1. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.892 |
ENSSDUP00000003957 | vamp3 | ENSSDUP00000003957 | ENSSDUP00000001421 | Vesicle-associated membrane protein 1. | V-SNARE coiled-coil homology domain-containing protein. | 0.756 |
LOC111220141 | ENSSDUP00000000294 | ENSSDUP00000010673 | ENSSDUP00000000294 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | PDZ domain-containing protein. | 0.714 |
LOC111220141 | ENSSDUP00000003957 | ENSSDUP00000010673 | ENSSDUP00000003957 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Vesicle-associated membrane protein 1. | 0.892 |
LOC111220141 | LOC111220465 | ENSSDUP00000010673 | ENSSDUP00000012008 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Syntaxin 4; Belongs to the syntaxin family. | 0.793 |
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