STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lbrLamin B receptor. (622 aa)    
Predicted Functional Partners:
LOC111222971
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
   
 0.993
msmo1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.962
dhcr24
24-dehydrocholesterol reductase.
 
 
 0.949
sqle
Squalene epoxidase a.
   
 
 0.912
tm7sf2
Transmembrane 7 superfamily member 2.
  
  
 
0.902
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 
 0.901
LOC111232752
Phosphoethanolamine methyltransferase.
   
 
 0.899
LOC111225164
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.898
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.898
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.888
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.