Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000015135 | rufy1 | ENSSDUP00000015135 | ENSSDUP00000012163 | annotation not available | RUN and FYVE domain containing 1. | 0.552 |
LOC111236936 | LOC111238899 | ENSSDUP00000017856 | ENSSDUP00000007480 | Uncharacterized protein. | RAB4B, member RAS oncogene family. | 0.542 |
LOC111236936 | rab4a | ENSSDUP00000017856 | ENSSDUP00000000924 | Uncharacterized protein. | RAB4a, member RAS oncogene family. | 0.540 |
LOC111236936 | rufy1 | ENSSDUP00000017856 | ENSSDUP00000012163 | Uncharacterized protein. | RUN and FYVE domain containing 1. | 0.616 |
LOC111238899 | LOC111236936 | ENSSDUP00000007480 | ENSSDUP00000017856 | RAB4B, member RAS oncogene family. | Uncharacterized protein. | 0.542 |
LOC111238899 | rab14 | ENSSDUP00000007480 | ENSSDUP00000006156 | RAB4B, member RAS oncogene family. | RAB14, member RAS oncogene family. | 0.543 |
LOC111238899 | rufy1 | ENSSDUP00000007480 | ENSSDUP00000012163 | RAB4B, member RAS oncogene family. | RUN and FYVE domain containing 1. | 0.676 |
btk | rufy1 | ENSSDUP00000006685 | ENSSDUP00000012163 | Tyrosine-protein kinase. | RUN and FYVE domain containing 1. | 0.552 |
cunh17orf67 | rufy1 | ENSSDUP00000004498 | ENSSDUP00000012163 | Si:dkey-31g6.6. | RUN and FYVE domain containing 1. | 0.600 |
itk | rufy1 | ENSSDUP00000014551 | ENSSDUP00000012163 | Tyrosine-protein kinase. | RUN and FYVE domain containing 1. | 0.552 |
rab14 | LOC111238899 | ENSSDUP00000006156 | ENSSDUP00000007480 | RAB14, member RAS oncogene family. | RAB4B, member RAS oncogene family. | 0.543 |
rab14 | rab4a | ENSSDUP00000006156 | ENSSDUP00000000924 | RAB14, member RAS oncogene family. | RAB4a, member RAS oncogene family. | 0.539 |
rab14 | rufy1 | ENSSDUP00000006156 | ENSSDUP00000012163 | RAB14, member RAS oncogene family. | RUN and FYVE domain containing 1. | 0.616 |
rab4a | LOC111236936 | ENSSDUP00000000924 | ENSSDUP00000017856 | RAB4a, member RAS oncogene family. | Uncharacterized protein. | 0.540 |
rab4a | rab14 | ENSSDUP00000000924 | ENSSDUP00000006156 | RAB4a, member RAS oncogene family. | RAB14, member RAS oncogene family. | 0.539 |
rab4a | rufy1 | ENSSDUP00000000924 | ENSSDUP00000012163 | RAB4a, member RAS oncogene family. | RUN and FYVE domain containing 1. | 0.966 |
rufy1 | ENSSDUP00000015135 | ENSSDUP00000012163 | ENSSDUP00000015135 | RUN and FYVE domain containing 1. | annotation not available | 0.552 |
rufy1 | LOC111236936 | ENSSDUP00000012163 | ENSSDUP00000017856 | RUN and FYVE domain containing 1. | Uncharacterized protein. | 0.616 |
rufy1 | LOC111238899 | ENSSDUP00000012163 | ENSSDUP00000007480 | RUN and FYVE domain containing 1. | RAB4B, member RAS oncogene family. | 0.676 |
rufy1 | btk | ENSSDUP00000012163 | ENSSDUP00000006685 | RUN and FYVE domain containing 1. | Tyrosine-protein kinase. | 0.552 |
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