Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111221548 | LOC111225814 | ENSSDUP00000012249 | ENSSDUP00000014543 | 10-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | 0.953 |
LOC111221548 | LOC111228663 | ENSSDUP00000012249 | ENSSDUP00000028157 | 10-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. | Zgc:153031. | 0.936 |
LOC111221548 | LOC111230873 | ENSSDUP00000012249 | ENSSDUP00000028015 | 10-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. | Uncharacterized protein. | 0.938 |
LOC111221548 | LOC111236485 | ENSSDUP00000012249 | ENSSDUP00000031277 | 10-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like. | 0.938 |
LOC111221548 | SHMT2 | ENSSDUP00000012249 | ENSSDUP00000028034 | 10-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.942 |
LOC111221548 | dhfr | ENSSDUP00000012249 | ENSSDUP00000013131 | 10-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. | Dihydrofolate reductase. | 0.946 |
LOC111221548 | gart | ENSSDUP00000012249 | ENSSDUP00000007401 | 10-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.973 |
LOC111221548 | mtr | ENSSDUP00000012249 | ENSSDUP00000023416 | 10-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.938 |
LOC111221548 | shmt1 | ENSSDUP00000012249 | ENSSDUP00000026097 | 10-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.942 |
LOC111221548 | shmt2 | ENSSDUP00000012249 | ENSSDUP00000026889 | 10-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.942 |
LOC111225814 | LOC111221548 | ENSSDUP00000014543 | ENSSDUP00000012249 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | 10-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. | 0.953 |
LOC111225814 | LOC111228663 | ENSSDUP00000014543 | ENSSDUP00000028157 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Zgc:153031. | 0.953 |
LOC111225814 | LOC111230873 | ENSSDUP00000014543 | ENSSDUP00000028015 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Uncharacterized protein. | 0.979 |
LOC111225814 | LOC111236485 | ENSSDUP00000014543 | ENSSDUP00000031277 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like. | 0.979 |
LOC111225814 | SHMT2 | ENSSDUP00000014543 | ENSSDUP00000028034 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.978 |
LOC111225814 | dhfr | ENSSDUP00000014543 | ENSSDUP00000013131 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Dihydrofolate reductase. | 0.956 |
LOC111225814 | gart | ENSSDUP00000014543 | ENSSDUP00000007401 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.999 |
LOC111225814 | mtr | ENSSDUP00000014543 | ENSSDUP00000023416 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.962 |
LOC111225814 | shmt1 | ENSSDUP00000014543 | ENSSDUP00000026097 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.978 |
LOC111225814 | shmt2 | ENSSDUP00000014543 | ENSSDUP00000026889 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.978 |
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