STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000012600Uncharacterized protein. (197 aa)    
Predicted Functional Partners:
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
   
 
 0.668
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 
 0.637
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 
 0.547
creld2
Cysteine-rich with EGF-like domains 2.
   
 
 0.523
LOC111217375
Peptidase S72 domain-containing protein.
    
 0.523
dag1
Dystroglycan 1.
    
 0.523
ddost
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]
   
 
 0.477
cdc42se2
CDC42 small effector 2.
   
 
 0.470
manf
Mesencephalic astrocyte-derived neurotrophic factor.
   
  
 0.423
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 
 0.423
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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