STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttkTtk protein kinase. (1009 aa)    
Predicted Functional Partners:
ndc80
NDC80 kinetochore complex component.
   
 
 0.989
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 
 0.987
nuf2
UF2 component of NDC80 kinetochore complex.
   
 
 0.973
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.965
ENSSDUP00000014731
Protein kinase domain-containing protein.
   
 
 0.940
bub1
BUB1 N-terminal domain-containing protein.
   
 
 0.940
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
  
 0.933
ENSSDUP00000001884
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.928
cdc20
Cell division cycle 20 homolog.
   
 
 0.928
espl1
Extra spindle pole bodies like 1, separase.
   
 
 0.926
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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