STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
styxl1Serine/threonine/tyrosine interacting-like 1. (295 aa)    
Predicted Functional Partners:
LOC111223411
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
    0.607
uhmk1
U2AF homology motif (UHM) kinase 1.
      
 0.570
LOC111224963
Nudix (nucleoside diphosphate linked moiety X)-type motif 4b.
      
 0.470
LOC111228476
Nudix (nucleoside diphosphate linked moiety X)-type motif 4a.
      
 0.470
ENSSDUP00000008140
Rad60-SLD domain-containing protein.
      
 0.424
podn
Podocan.
    
 
 0.416
gak
Cyclin G associated kinase.
    
 0.408
exosc8
Exosome component 8.
   
 
 0.405
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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