STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndufaf4NADH:ubiquinone oxidoreductase complex assembly factor 4. (180 aa)    
Predicted Functional Partners:
ndufaf3
NADH:ubiquinone oxidoreductase complex assembly factor.
   
 0.998
timmdc1
Translocase of inner mitochondrial membrane domain containing 1.
   
 0.997
ndufs7
NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.
    
 0.989
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
    
 0.986
ndufs3
NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family.
   
 0.955
ndufaf1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
    
 0.927
LOC111230487
NADH:ubiquinone oxidoreductase core subunit S8a.
    
 0.919
ndufa5
NADH:ubiquinone oxidoreductase subunit A5.
   
 0.918
ndufaf2
NADH:ubiquinone oxidoreductase complex assembly factor 2.
   
 0.913
LOC111220164
Si:dkey-57k2.7.
    
 0.910
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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