STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psmf1Proteasome inhibitor subunit 1. (277 aa)    
Predicted Functional Partners:
fbxo7
F-box protein 7.
   
 0.949
psma1
Proteasome subunit alpha type.
   
 0.877
ufd1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.837
psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
 0.833
psmb7
Proteasome subunit beta.
    
 0.827
LOC111221130
Proteasome subunit beta.
    
 0.827
psma8
Proteasome subunit alpha type.
   
 0.825
psmb1
Proteasome subunit beta.
    
 0.807
psmc6
Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.
   
 0.791
psma2
Proteasome subunit alpha type.
    
 0.791
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.