STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itgbl1Integrin, beta-like 1. (401 aa)    
Predicted Functional Partners:
ENSSDUP00000000134
Uncharacterized protein.
   
 0.688
LOC111218778
Tensin 1b.
   
 0.688
LOC111230706
Tensin 2a.
   
 0.688
TNS3
Tensin 3.
   
 0.688
ENSSDUP00000031051
Uncharacterized protein.
   
 0.688
ENSSDUP00000031081
Tensin 1.
   
 0.688
LOC111221631
Tensin 2b.
   
 0.688
LOC111216899
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.623
sh3rf3
SH3 domain containing ring finger 3.
   
 
 0.606
LOC111234414
Integrin linked kinase.
    
 0.565
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.