STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111218819Uncharacterized protein. (1830 aa)    
Predicted Functional Partners:
fgf23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
    
 0.767
fgf19
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.726
Fgf21
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.575
LOC111226155
Fibroblast growth factor receptor.
   
 0.558
LOC111234275
Fibroblast growth factor receptor.
   
 0.549
fgfr3
Fibroblast growth factor receptor.
   
 0.549
fgfr2
Fibroblast growth factor receptor 2.
   
 0.541
ydjc
YdjC chitooligosaccharide deacetylase homolog.
  
 
 0.532
LOC111224260
Fibroblast growth factor receptor.
   
 0.521
fgf3
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.508
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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