STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000013230Uncharacterized protein. (201 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
 0.642
lats1
Large tumor suppressor kinase 1.
    
 0.574
lats2
Large tumor suppressor kinase 2.
    
 0.574
LOC111217580
Intersectin 2b.
   
  0.529
itsn2
Intersectin 2a.
   
  0.529
sav1
Salvador family WW domain containing protein 1.
    
 0.490
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.483
birc6
Baculoviral IAP repeat containing 6.
    
 0.476
ENSSDUP00000030530
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.476
LOC111224361
Uncharacterized protein.
    
 0.465
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.