STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111226573Cytoplasmic polyadenylation element binding protein 4a. (747 aa)    
Predicted Functional Partners:
PLK1
Serine/threonine-protein kinase PLK.
   
 0.912
cdk1
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.907
ccnb2
Cyclin B2; Belongs to the cyclin family.
   
 
 0.904
rnf44
Ring finger protein 44.
      
 0.537
pin4
Peptidyl-prolyl cis-trans isomerase.
    
 
 0.527
sympk
Symplekin.
    
 
 0.509
tent2
Terminal nucleotidyltransferase 2.
   
 
 0.418
trip12
Thyroid hormone receptor interactor 12.
      
 0.416
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.