LOC111232182 protein (Seriola dumerili) - STRING interaction network

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Score

LOC111232182

Scaffold attachment factor B. (770 aa)

Predicted Functional Partners:

prpf38a

0.595

snrnp70

0.547

ncbp2

0.524

rbmx

0.521

ngdn

0.502

sumo2

0.493

SUMO3

0.493

LOC111218242

0.493

LOC111236357

0.493

LOC111235663

0.491

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111218242	LOC111232182	ENSSDUP00000024649	ENSSDUP00000013351	Small ubiquitin-related modifier.	Scaffold attachment factor B.	0.493
LOC111232182	LOC111218242	ENSSDUP00000013351	ENSSDUP00000024649	Scaffold attachment factor B.	Small ubiquitin-related modifier.	0.493
LOC111232182	LOC111235663	ENSSDUP00000013351	ENSSDUP00000008764	Scaffold attachment factor B.	Apoptotic chromatin condensation inducer 1b.	0.491
LOC111232182	LOC111236357	ENSSDUP00000013351	ENSSDUP00000028616	Scaffold attachment factor B.	Small ubiquitin-related modifier.	0.493
LOC111232182	SUMO3	ENSSDUP00000013351	ENSSDUP00000019646	Scaffold attachment factor B.	Small ubiquitin-related modifier.	0.493
LOC111232182	ncbp2	ENSSDUP00000013351	ENSSDUP00000021219	Scaffold attachment factor B.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.524
LOC111232182	ngdn	ENSSDUP00000013351	ENSSDUP00000028524	Scaffold attachment factor B.	Neuroguidin, EIF4E binding protein.	0.502
LOC111232182	prpf38a	ENSSDUP00000013351	ENSSDUP00000001671	Scaffold attachment factor B.	Pre-mRNA processing factor 38A.	0.595
LOC111232182	rbmx	ENSSDUP00000013351	ENSSDUP00000000269	Scaffold attachment factor B.	RNA binding motif protein X-linked.	0.521
LOC111232182	snrnp70	ENSSDUP00000013351	ENSSDUP00000024207	Scaffold attachment factor B.	Small nuclear ribonucleoprotein 70 (U1).	0.547
LOC111232182	sumo2	ENSSDUP00000013351	ENSSDUP00000003480	Scaffold attachment factor B.	Small ubiquitin-related modifier.	0.493
LOC111235663	LOC111232182	ENSSDUP00000008764	ENSSDUP00000013351	Apoptotic chromatin condensation inducer 1b.	Scaffold attachment factor B.	0.491
LOC111236357	LOC111232182	ENSSDUP00000028616	ENSSDUP00000013351	Small ubiquitin-related modifier.	Scaffold attachment factor B.	0.493
SUMO3	LOC111232182	ENSSDUP00000019646	ENSSDUP00000013351	Small ubiquitin-related modifier.	Scaffold attachment factor B.	0.493
ncbp2	LOC111232182	ENSSDUP00000021219	ENSSDUP00000013351	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Scaffold attachment factor B.	0.524
ncbp2	prpf38a	ENSSDUP00000021219	ENSSDUP00000001671	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Pre-mRNA processing factor 38A.	0.600
ncbp2	rbmx	ENSSDUP00000021219	ENSSDUP00000000269	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	RNA binding motif protein X-linked.	0.609
ncbp2	snrnp70	ENSSDUP00000021219	ENSSDUP00000024207	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Small nuclear ribonucleoprotein 70 (U1).	0.997
ngdn	LOC111232182	ENSSDUP00000028524	ENSSDUP00000013351	Neuroguidin, EIF4E binding protein.	Scaffold attachment factor B.	0.502
prpf38a	LOC111232182	ENSSDUP00000001671	ENSSDUP00000013351	Pre-mRNA processing factor 38A.	Scaffold attachment factor B.	0.595