STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rspo2R-spondin 2. (253 aa)    
Predicted Functional Partners:
LOC111222303
RING-type domain-containing protein.
   
 0.992
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
   
 0.965
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
    
 0.929
ENSSDUP00000007785
R-spondin 4.
  
  
0.912
rspo1
R-spondin 1.
  
  
 
0.903
znrf3
Zinc and ring finger 3.
   
 0.858
ENSSDUP00000019681
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.670
RNF126
Ring finger protein 126.
   
 0.627
rnf115
Ring finger protein 115.
   
 0.627
LOC111228994
Ring finger protein 126.
   
 0.627
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.