STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtf1Metal-regulatory transcription factor 1. (815 aa)    
Predicted Functional Partners:
slc31a1
Solute carrier family 31 member 1.
    
 
 0.509
cntn2
Contactin 2.
      
 0.471
LOC111230171
Aryl hydrocarbon receptor nuclear translocator.
    
 0.459
arnt2
Aryl-hydrocarbon receptor nuclear translocator 2.
    
 0.459
LOC111222187
Estrogen-related receptor alpha.
    
 0.458
ube2l3
Ubiquitin-conjugating enzyme E2L 3b; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.434
srpx2
Sushi-repeat containing protein X-linked 2.
      
 0.430
tcf7
Transcription factor 7.
    
 0.423
atp7a
ATPase copper transporting alpha.
    
 
 0.413
LOC111227716
3-hydroxy-3-methylglutaryl coenzyme A reductase.
    
 0.413
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.