STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM20RNA binding motif protein 20. (1132 aa)    
Predicted Functional Partners:
LOC111229734
Structural maintenance of chromosomes protein.
   
 0.958
smc1a
Structural maintenance of chromosomes protein.
   
 0.958
pds5b
PDS5 cohesin associated factor B.
   
 0.953
pds5a
PDS5 cohesin associated factor A.
   
 0.953
esco2
Establishment of sister chromatid cohesion N-acetyltransferase 2.
   
 0.930
ENSSDUP00000012192
Uncharacterized protein.
   
 0.930
LOC111234860
RAD21 cohesin complex component like 1.
   
 0.923
LOC111227841
RAD21 cohesin complex component a.
   
 0.923
LOC111223429
RAD21 cohesin complex component b.
   
 0.923
LOC111237789
Nipped-B protein.
   
 0.919
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.