STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111220842PVR cell adhesion molecule related 2 like. (546 aa)    
Predicted Functional Partners:
LOC111232338
Uncharacterized protein.
    
 
0.925
LOC111230059
Uncharacterized protein.
    
 
0.925
ENSSDUP00000019470
Nectin cell adhesion molecule 3b.
    
 
0.925
tomm22
Translocase of outer mitochondrial membrane 22 homolog (yeast).
   
 0.924
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.918
pard3
Par-3 family cell polarity regulator alpha, b.
    
  0.901
LOC111230064
Si:ch73-22o12.1.
     
 
0.900
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
    
 0.848
timm50
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.789
tomm5
Translocase of outer mitochondrial membrane 5 homolog (yeast).
   
 0.786
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.