STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ankrd9Ankyrin repeat domain 9. (279 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.596
commd8
COMM domain containing 8.
   
  0.582
rnf7
Ring finger protein 7.
    
  0.578
commd1
Copper metabolism (Murr1) domain containing 1.
    
  0.572
LOC111228608
COMM domain containing 4.
    
 0.568
dnajc17
DnaJ (Hsp40) homolog, subfamily C, member 17.
   
  
 0.556
commd9
COMM domain containing 9.
    
  0.553
ibtk
Inhibitor of Bruton agammaglobulinemia tyrosine kinase.
   
 0.552
LOC111226669
COMM domain containing 5.
    
  0.544
commd7
COMM domain containing 7.
    
  0.515
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.