STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc31a2Solute carrier family 31 member 2. (155 aa)    
Predicted Functional Partners:
LOC111218542
Cytochrome c oxidase copper chaperone COX17.
   
  
 0.571
atox1
Antioxidant 1 copper chaperone.
      
 0.559
ccs
Copper chaperone for superoxide dismutase.
    
 
 0.555
ENSSDUP00000021024
Cytochrome c oxidase assembly homolog 11 (yeast).
      
 0.463
atp7a
ATPase copper transporting alpha.
    
 
 0.460
atp7b
ATPase copper transporting beta.
    
 
 0.460
yipf6
Protein YIPF.
    
 
 0.456
SLC39A11
Solute carrier family 39 member 11.
   
  
 0.444
slc38a6
Solute carrier family 38 member 6.
   
  
 0.438
LOC111225195
Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals.
   
 
 0.438
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.