Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cdc45 | pola1 | ENSSDUP00000003823 | ENSSDUP00000003623 | CDC45 cell division cycle 45 homolog (S. cerevisiae). | DNA polymerase. | 0.989 |
cdc45 | pold1 | ENSSDUP00000003823 | ENSSDUP00000023525 | CDC45 cell division cycle 45 homolog (S. cerevisiae). | DNA polymerase. | 0.950 |
cdc45 | pole | ENSSDUP00000003823 | ENSSDUP00000018018 | CDC45 cell division cycle 45 homolog (S. cerevisiae). | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.993 |
cdc45 | pole2 | ENSSDUP00000003823 | ENSSDUP00000021487 | CDC45 cell division cycle 45 homolog (S. cerevisiae). | DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. | 0.997 |
cdc45 | pole3 | ENSSDUP00000003823 | ENSSDUP00000027784 | CDC45 cell division cycle 45 homolog (S. cerevisiae). | Polymerase (DNA directed), epsilon 3 (p17 subunit). | 0.946 |
cdc45 | pole4 | ENSSDUP00000003823 | ENSSDUP00000014098 | CDC45 cell division cycle 45 homolog (S. cerevisiae). | Polymerase (DNA-directed), epsilon 4, accessory subunit. | 0.823 |
cdc45 | prim2 | ENSSDUP00000003823 | ENSSDUP00000032722 | CDC45 cell division cycle 45 homolog (S. cerevisiae). | DNA primase subunit 2. | 0.982 |
cdc45 | rev3l | ENSSDUP00000003823 | ENSSDUP00000014191 | CDC45 cell division cycle 45 homolog (S. cerevisiae). | REV3 like, DNA directed polymerase zeta catalytic subunit. | 0.921 |
cdc45 | rfc1 | ENSSDUP00000003823 | ENSSDUP00000031244 | CDC45 cell division cycle 45 homolog (S. cerevisiae). | Replication factor C subunit 1. | 0.582 |
cdc45 | rfc3 | ENSSDUP00000003823 | ENSSDUP00000019982 | CDC45 cell division cycle 45 homolog (S. cerevisiae). | Replication factor C (activator 1) 3. | 0.839 |
pola1 | cdc45 | ENSSDUP00000003623 | ENSSDUP00000003823 | DNA polymerase. | CDC45 cell division cycle 45 homolog (S. cerevisiae). | 0.989 |
pola1 | pold1 | ENSSDUP00000003623 | ENSSDUP00000023525 | DNA polymerase. | DNA polymerase. | 0.987 |
pola1 | pole | ENSSDUP00000003623 | ENSSDUP00000018018 | DNA polymerase. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.997 |
pola1 | pole2 | ENSSDUP00000003623 | ENSSDUP00000021487 | DNA polymerase. | DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. | 0.996 |
pola1 | pole3 | ENSSDUP00000003623 | ENSSDUP00000027784 | DNA polymerase. | Polymerase (DNA directed), epsilon 3 (p17 subunit). | 0.988 |
pola1 | pole4 | ENSSDUP00000003623 | ENSSDUP00000014098 | DNA polymerase. | Polymerase (DNA-directed), epsilon 4, accessory subunit. | 0.915 |
pola1 | prim2 | ENSSDUP00000003623 | ENSSDUP00000032722 | DNA polymerase. | DNA primase subunit 2. | 0.999 |
pola1 | rev3l | ENSSDUP00000003623 | ENSSDUP00000014191 | DNA polymerase. | REV3 like, DNA directed polymerase zeta catalytic subunit. | 0.544 |
pola1 | rfc1 | ENSSDUP00000003623 | ENSSDUP00000031244 | DNA polymerase. | Replication factor C subunit 1. | 0.952 |
pola1 | rfc3 | ENSSDUP00000003623 | ENSSDUP00000019982 | DNA polymerase. | Replication factor C (activator 1) 3. | 0.969 |
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