STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111220443Growth arrest specific 7. (474 aa)    
Predicted Functional Partners:
LOC111217580
Intersectin 2b.
   
 0.993
itsn2
Intersectin 2a.
   
 0.993
itsn1
Intersectin 1 (SH3 domain protein).
   
0.981
gak
Cyclin G associated kinase.
   
 0.837
LOC111225061
WASP like actin nucleation promoting factor b.
   
 0.783
LOC111235999
WASP like actin nucleation promoting factor a.
   
 0.783
was
WASP actin nucleation promoting factor a.
   
 0.783
clhc1
TSNAXIP1_N domain-containing protein.
   
 0.768
LOC111222565
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.768
ENSSDUP00000007704
Uncharacterized protein.
   
 0.768
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.