STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxi1Forkhead box I3b. (391 aa)    
Predicted Functional Partners:
LOC111221567
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
     
 0.561
cpsf4
Cleavage and polyadenylation specific factor 4.
    
 
 0.478
plk2
Serine/threonine-protein kinase PLK.
   
 0.459
PLK1
Serine/threonine-protein kinase PLK.
   
 0.459
plk3
Serine/threonine-protein kinase PLK.
   
 0.459
CDC25B
Cell division cycle 25B.
   
 0.456
gcm2
Glial cells missing transcription factor 2.
   
 
 0.456
furin
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
     
 0.450
tp63
Tumor protein 63 (p63); Acts as a sequence specific DNA binding transcriptional activator or repressor. The isoforms contain a varying set of transactivation and auto-regulating transactivation inhibiting domains thus showing an isoform specific activity. May be required in conjunction with TP73/p73 for initiation of p53/TP53 dependent apoptosis in response to genotoxic insults and the presence of activated oncogenes.
    
 0.435
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.