STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
robo1Roundabout, axon guidance receptor, homolog 1 (Drosophila). (1535 aa)    
Predicted Functional Partners:
LOC111232433
Slit homolog 3 (Drosophila).
   
 0.796
LOC111235880
Slit homolog 1b (Drosophila).
   
 0.736
slit1
Slit homolog 1a (Drosophila).
   
 0.736
slit2
Slit homolog 2 (Drosophila).
   
 0.736
Nyx
Nyctalopin.
   
 0.722
ENSSDUP00000011826
LRRNT domain-containing protein.
   
 0.703
abl2
Tyrosine-protein kinase.
   
 0.520
abl1
Tyrosine-protein kinase.
   
 0.520
LOC111232635
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
0.491
LOC111218696
SLIT and NTRK-like family, member 5b.
   
 0.490
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.