STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111236887BH4_2 domain-containing protein. (225 aa)    
Predicted Functional Partners:
Bcl2l11
Uncharacterized protein.
    
 0.993
becn1
Beclin 1, autophagy related.
    
 0.990
bad
BCL2 associated agonist of cell death b.
   
 0.988
LOC111221747
Zgc:153993.
    
 0.975
bnip3
BCL2 interacting protein 3.
    
 0.957
LOC111239883
Zgc:73226.
    
 0.957
ddit3
DNA-damage-inducible transcript 3.
   
 
 0.931
bax
BCL2 associated X, apoptosis regulator a.
    
 
 0.930
LOC111233889
Uncharacterized protein.
   
 
 0.925
LOC111226417
Mitogen-activated protein kinase.
   
 0.920
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.