Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000014611 | LOC111220267 | ENSSDUP00000014611 | ENSSDUP00000017729 | Uncharacterized protein. | Sarcoglycan, alpha. | 0.720 |
ENSSDUP00000014611 | elp1 | ENSSDUP00000014611 | ENSSDUP00000009163 | Uncharacterized protein. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.711 |
ENSSDUP00000014611 | elp3 | ENSSDUP00000014611 | ENSSDUP00000011018 | Uncharacterized protein. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | 0.759 |
ENSSDUP00000014611 | elp4 | ENSSDUP00000014611 | ENSSDUP00000028769 | Uncharacterized protein. | Elongator acetyltransferase complex subunit 4. | 0.523 |
ENSSDUP00000014611 | nob1 | ENSSDUP00000014611 | ENSSDUP00000009957 | Uncharacterized protein. | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | 0.558 |
ENSSDUP00000014611 | nts | ENSSDUP00000014611 | ENSSDUP00000006346 | Uncharacterized protein. | Neurotensin. | 0.470 |
ENSSDUP00000014611 | sars1 | ENSSDUP00000014611 | ENSSDUP00000023510 | Uncharacterized protein. | Seryl-tRNA synthetase. | 0.565 |
ENSSDUP00000014611 | sars2 | ENSSDUP00000014611 | ENSSDUP00000014647 | Uncharacterized protein. | Seryl-tRNA synthetase 2, mitochondrial. | 0.565 |
ENSSDUP00000014611 | sgce | ENSSDUP00000014611 | ENSSDUP00000008301 | Uncharacterized protein. | Sarcoglycan, epsilon. | 0.720 |
ENSSDUP00000014611 | tmem179b | ENSSDUP00000014611 | ENSSDUP00000029368 | Uncharacterized protein. | Zgc:110591. | 0.565 |
LOC111220267 | ENSSDUP00000014611 | ENSSDUP00000017729 | ENSSDUP00000014611 | Sarcoglycan, alpha. | Uncharacterized protein. | 0.720 |
elp1 | ENSSDUP00000014611 | ENSSDUP00000009163 | ENSSDUP00000014611 | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | Uncharacterized protein. | 0.711 |
elp1 | elp3 | ENSSDUP00000009163 | ENSSDUP00000011018 | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | 0.998 |
elp1 | elp4 | ENSSDUP00000009163 | ENSSDUP00000028769 | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | Elongator acetyltransferase complex subunit 4. | 0.996 |
elp3 | ENSSDUP00000014611 | ENSSDUP00000011018 | ENSSDUP00000014611 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Uncharacterized protein. | 0.759 |
elp3 | elp1 | ENSSDUP00000011018 | ENSSDUP00000009163 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.998 |
elp3 | elp4 | ENSSDUP00000011018 | ENSSDUP00000028769 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Elongator acetyltransferase complex subunit 4. | 0.993 |
elp3 | nob1 | ENSSDUP00000011018 | ENSSDUP00000009957 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | 0.466 |
elp4 | ENSSDUP00000014611 | ENSSDUP00000028769 | ENSSDUP00000014611 | Elongator acetyltransferase complex subunit 4. | Uncharacterized protein. | 0.523 |
elp4 | elp1 | ENSSDUP00000028769 | ENSSDUP00000009163 | Elongator acetyltransferase complex subunit 4. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.996 |
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