STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111226460Nuclear receptor subfamily 2, group F, member 6b. (406 aa)    
Predicted Functional Partners:
ano8
Anoctamin.
      
 0.605
LOC111228917
Anoctamin.
      
 0.601
ncor1
Nuclear receptor corepressor 1.
    
 0.556
ncor2
Nuclear receptor corepressor 2.
    
 0.556
med1
Mediator complex subunit 1.
    
  0.508
LOC111228814
Plasmalemma vesicle associated protein a.
    
 0.455
lipe
Lipase, hormone-sensitive b.
      
 0.424
LOC111226526
Serine/threonine-protein phosphatase.
   
 
 0.421
ENSSDUP00000008290
BolA family member 1; Belongs to the BolA/IbaG family.
      
 0.416
ENSSDUP00000008307
BolA family member 1; Belongs to the BolA/IbaG family.
      
 0.416
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.