STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adgrb1Adhesion G protein-coupled receptor B1a; Belongs to the G-protein coupled receptor 2 family. (1529 aa)    
Predicted Functional Partners:
LOC111218510
RAN binding protein 2.
   
 0.978
kpnb1
Karyopherin (importin) beta 1.
   
 0.898
xpot
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.817
nup153
Nucleoporin 153.
    
 0.816
LOC111230311
RAN GTPase activating protein 1a.
   
 0.811
LOC111219898
Ran GTPase activating protein 1b.
   
 0.811
ranbp1
RAN binding protein 1.
   
 0.773
ENSSDUP00000003159
Uncharacterized protein.
   
 0.773
GCC2
GRIP domain-containing protein.
   
 0.773
nup50
Nucleoporin 50.
   
 0.727
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.