STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111237874Melanocortin 4 receptor. (334 aa)    
Predicted Functional Partners:
LOC111238516
Uncharacterized protein.
    
 0.953
LOC111240052
Proopiomelanocortin.
    
 0.933
LOC111230638
Uncharacterized protein.
    
 0.933
mrap2
Melanocortin 2 receptor accessory protein 2b.
    
 
 0.817
Hcrt
Hypocretin (orexin) neuropeptide precursor.
   
 0.755
npy
Neuropeptide Y.
    
 0.731
ENSSDUP00000011142
Uncharacterized protein.
    
 
 0.721
gnal
Uncharacterized protein.
    
 0.710
LOC111236865
Uncharacterized protein.
    
 0.710
LOC111223941
GNAS complex locus.
    
 0.710
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.