Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111236098 | eif3l | ENSSDUP00000015010 | ENSSDUP00000006542 | EH-domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.609 |
LOC111236098 | rbsn | ENSSDUP00000015010 | ENSSDUP00000017718 | EH-domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Rabenosyn, RAB effector. | 0.777 |
LOC111236098 | snap29 | ENSSDUP00000015010 | ENSSDUP00000031824 | EH-domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Synaptosome associated protein 29. | 0.460 |
LOC111236098 | vps45 | ENSSDUP00000015010 | ENSSDUP00000001834 | EH-domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family. | 0.443 |
eif3l | LOC111236098 | ENSSDUP00000006542 | ENSSDUP00000015010 | Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | EH-domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.609 |
rbsn | LOC111236098 | ENSSDUP00000017718 | ENSSDUP00000015010 | Rabenosyn, RAB effector. | EH-domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.777 |
rbsn | snap29 | ENSSDUP00000017718 | ENSSDUP00000031824 | Rabenosyn, RAB effector. | Synaptosome associated protein 29. | 0.434 |
rbsn | vps45 | ENSSDUP00000017718 | ENSSDUP00000001834 | Rabenosyn, RAB effector. | Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family. | 0.999 |
snap29 | LOC111236098 | ENSSDUP00000031824 | ENSSDUP00000015010 | Synaptosome associated protein 29. | EH-domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.460 |
snap29 | rbsn | ENSSDUP00000031824 | ENSSDUP00000017718 | Synaptosome associated protein 29. | Rabenosyn, RAB effector. | 0.434 |
vps45 | LOC111236098 | ENSSDUP00000001834 | ENSSDUP00000015010 | Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family. | EH-domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.443 |
vps45 | rbsn | ENSSDUP00000001834 | ENSSDUP00000017718 | Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family. | Rabenosyn, RAB effector. | 0.999 |