STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111218168Hemopexin a. (412 aa)    
Predicted Functional Partners:
LOC111238766
Alpha-1-microglobulin/bikunin precursor.
   
 
 0.771
LOC111229011
Alpha-2-HS-glycoprotein 2.
   
  
 0.707
LOC111237521
Fibrinogen alpha chain.
   
 0.637
LOC111238335
Microseminoprotein, beta-like.
   
 0.621
TIMP2
TIMP metallopeptidase inhibitor 2.
    
 0.602
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.598
fgg
Fibrinogen gamma chain.
   
 0.574
LOC111227194
TIMP metallopeptidase inhibitor 2b.
    
 0.546
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.518
fgb
Fibrinogen beta chain.
   
 0.477
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.