STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111235220Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a. (1149 aa)    
Predicted Functional Partners:
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
    
 0.979
LOC111229141
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
    
 0.951
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.929
prkaca
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
    
 0.929
LOC111227008
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
    
 0.929
LOC111235208
cGMP-dependent protein kinase.
   
 
 0.927
LOC111231893
Si:ch211-247n2.1.
     
  0.923
LOC111219727
Potassium calcium-activated channel subfamily M alpha 1.
  
  
 
0.900
kcnn4
Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.
      
 0.465
ctnnal1
Catenin (cadherin-associated protein), alpha-like 1.
   
 
 0.447
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.