STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
polhPolymerase (DNA directed), eta. (690 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.998
rev1
REV1 DNA directed polymerase.
   
0.985
rev3l
REV3 like, DNA directed polymerase zeta catalytic subunit.
   
 0.976
rchy1
Uncharacterized protein.
    
 0.967
mad2l2
Mitotic arrest deficient 2 like 2.
   
 0.963
rad18
RAD18 E3 ubiquitin protein ligase.
    
 
 0.936
pold1
DNA polymerase.
   
 0.927
rps27a
Ribosomal protein S27a.
    
 0.899
ubb
Uncharacterized protein.
    
 0.898
ubc
Uncharacterized protein.
    
 0.898
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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