STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gramd1aGRAM domain containing 1A. (756 aa)    
Predicted Functional Partners:
ENSSDUP00000007359
Uncharacterized protein.
 
  
   0.813
ttc37
Tetratricopeptide repeat domain 37.
      
 0.616
rbm42
RNA binding motif protein 42.
      
 0.471
Scn2b
Sodium channel, voltage-gated, type II, beta.
    
 0.452
MPZL2
Myelin protein zero like 2.
    
 0.452
ENSSDUP00000018370
Myelin protein zero-like 2b.
    
 0.452
haus5
HAUS augmin-like complex, subunit 5.
      
 0.418
pctp
Phosphatidylcholine transfer protein.
      
 0.418
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.