Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111221375 | POU3F4 | ENSSDUP00000007335 | ENSSDUP00000015985 | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | POU domain protein. | 0.424 |
LOC111221375 | gtf2b | ENSSDUP00000007335 | ENSSDUP00000015606 | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | General transcription factor IIB. | 0.992 |
POU3F4 | LOC111221375 | ENSSDUP00000015985 | ENSSDUP00000007335 | POU domain protein. | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.424 |
POU3F4 | gtf2b | ENSSDUP00000015985 | ENSSDUP00000015606 | POU domain protein. | General transcription factor IIB. | 0.412 |
POU3F4 | pcf11 | ENSSDUP00000015985 | ENSSDUP00000032564 | POU domain protein. | PCF11 cleavage and polyadenylation factor subunit. | 0.479 |
POU3F4 | snapc4 | ENSSDUP00000015985 | ENSSDUP00000026085 | POU domain protein. | Uncharacterized protein. | 0.442 |
gtf2b | LOC111221375 | ENSSDUP00000015606 | ENSSDUP00000007335 | General transcription factor IIB. | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.992 |
gtf2b | POU3F4 | ENSSDUP00000015606 | ENSSDUP00000015985 | General transcription factor IIB. | POU domain protein. | 0.412 |
gtf2b | pcf11 | ENSSDUP00000015606 | ENSSDUP00000032564 | General transcription factor IIB. | PCF11 cleavage and polyadenylation factor subunit. | 0.840 |
gtf2b | snapc4 | ENSSDUP00000015606 | ENSSDUP00000026085 | General transcription factor IIB. | Uncharacterized protein. | 0.869 |
pcf11 | POU3F4 | ENSSDUP00000032564 | ENSSDUP00000015985 | PCF11 cleavage and polyadenylation factor subunit. | POU domain protein. | 0.479 |
pcf11 | gtf2b | ENSSDUP00000032564 | ENSSDUP00000015606 | PCF11 cleavage and polyadenylation factor subunit. | General transcription factor IIB. | 0.840 |
snapc4 | POU3F4 | ENSSDUP00000026085 | ENSSDUP00000015985 | Uncharacterized protein. | POU domain protein. | 0.442 |
snapc4 | gtf2b | ENSSDUP00000026085 | ENSSDUP00000015606 | Uncharacterized protein. | General transcription factor IIB. | 0.869 |