STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc127Coiled-coil domain containing 127a. (273 aa)    
Predicted Functional Partners:
supt7l
SPT7 like, STAGA complex gamma subunit.
   
  
 0.566
Fam104a
Uncharacterized protein.
      
 0.518
mto1
Mitochondrial tRNA translation optimization 1.
      
 0.453
tada2b
Transcriptional adapter.
      
 0.431
asb7
Ankyrin repeat and SOCS box containing 7.
      
 0.426
cnot10
CCR4-NOT transcription complex, subunit 10.
      
 0.422
ENSSDUP00000026496
Si:ch211-193l2.10.
      
 0.416
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.