STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111227220Uncharacterized protein. (128 aa)    
Predicted Functional Partners:
LOC111235103
Neuropeptides B/W receptor 2a; Belongs to the G-protein coupled receptor 1 family.
    
 0.983
npb
Neuropeptide B.
  
  
 
0.902
apln
Apelin.
     
 0.658
ENSSDUP00000031756
NMU domain-containing protein.
     
 0.626
penk
Proenkephalin a.
     
 0.605
gal
Galanin/GMAP prepropeptide.
     
 0.579
LOC111216952
Somatostatin.
     
 0.545
LOC111221929
Prepronociceptin a.
     
 0.537
agtr1
Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.
     
 0.527
LOC111223694
Peptide YYa.
     
 0.517
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.