STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccnl1Cyclin L1a; Belongs to the cyclin family. (548 aa)    
Predicted Functional Partners:
LOC111227593
Cyclin-dependent kinase 11B.
   
 
 0.700
cdk10
Cyclin-dependent kinase 10; Belongs to the protein kinase superfamily.
   
 
 0.700
gak
Cyclin G associated kinase.
      
 0.652
clasrp
CLK4-associating serine/arginine rich protein.
   
  
 0.623
cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
      
 0.606
ccnh
Cyclin H; Belongs to the cyclin family.
      
 0.563
ZNF276
Zinc finger protein 276.
   
  
 0.511
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
  
 0.485
amdhd1
Amidohydrolase domain containing 1.
      
 0.479
cdk19
Cyclin-dependent kinase 19; Belongs to the protein kinase superfamily.
      
 0.465
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.