STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000016596Uncharacterized protein. (169 aa)    
Predicted Functional Partners:
LOC111228121
Uncharacterized protein.
   
 0.537
LOC111239804
Uncharacterized protein.
     
 0.447
LOC111228081
Uncharacterized protein.
    
 0.433
ppp1r13l
Protein phosphatase 1, regulatory subunit 13 like.
   
 0.421
tp53bp2
Tumor protein p53 binding protein, 2a.
   
 0.421
ppp1r13b
Protein phosphatase 1, regulatory subunit 13Bb.
   
 0.421
LOC111225440
Protein phosphatase 1, regulatory subunit 13Ba.
   
 0.420
LOC111228083
Uncharacterized protein.
    
 0.415
LOC111232977
Tumor protein p53 binding protein, 2b.
   
 0.413
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.