STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stam2Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2. (511 aa)    
Predicted Functional Partners:
hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
   
0.999
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
  
 
0.988
usp8
Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family.
    
 0.968
rps27a
Ribosomal protein S27a.
   
 0.951
LOC111217580
Intersectin 2b.
    
0.948
itsn2
Intersectin 2a.
    
0.948
ptpn23
Protein tyrosine phosphatase, non-receptor type 23, a.
   
 0.934
stambpl1
STAM binding protein-like 1.
    
 0.933
stambp
STAM binding protein b.
    
 0.933
ubb
Uncharacterized protein.
   
 0.905
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.