STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crebl2cAMP responsive element binding protein-like 2. (121 aa)    
Predicted Functional Partners:
crebrf
Creb3 regulatory factor.
   
 
 0.707
borcs6
Si:dkey-72l14.4.
    
 
 0.581
LOC111216947
Potassium channel subfamily K member.
      
 0.577
snapin
SNAP associated protein.
   
 
 0.549
bloc1s1
Biogenesis of lysosomal organelles complex-1, subunit 1.
    
 
 0.539
borcs8
BLOC-1 related complex subunit 8.
    
 
 0.520
fdps
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
   
  
 0.501
kxd1
KxDL motif containing 1.
    
 
 0.499
ETV6
ETS variant 6.
      
 0.440
bloc1s2
Biogenesis of lysosomal organelles complex-1, subunit 2.
      
 0.430
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.