STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fahFumarylacetoacetase. (403 aa)    
Predicted Functional Partners:
gstz1
Glutathione S-transferase zeta 1; Belongs to the GST superfamily.
  
 
 0.955
hgd
Homogentisate 1,2-dioxygenase.
 
 0.941
LOC111227293
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.796
LOC111222248
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.794
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid.
  
 
 0.770
ttc36
Tetratricopeptide repeat domain 36.
   
  
 0.717
hpdl
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.703
tat
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
  
  
 0.702
hmgcl
3-hydroxy-3-methylglutaryl-CoA lyase.
  
 
 0.655
hmgcll1
3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1.
  
 
 0.655
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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